R and python tutorials

A set of tutorials designed for the undergraduate introduction to bioinformatics course (BINF2010).

Week 1: Setting up:

Let’s start at the very beginning (a very good place to start)
Installation of sofware (R, RStudio, Python3 and VSCode) for windows, macs, or linux

Week 2: Python basics

First things first! Start here!

Week 3: Data Viz

Python visualisations.

Week 4: Snakes on a plane

Data wrangling.

Week 5: Biopython basics (and assignment help)

Help!

Week 6: BReak!

Week 7: R basics

Let’s get staRted.

Week 8: MoRe R

Some visual things you can do with R.

Week 9: Even moRe R

Functions in R.

Week 10: Shiny

• Shiny - R
• Shiny - python

Adapted from:

• URP
• UCDavis bioinformatics training

  Inspired by many:

• R Genomics
• Data mentor
• Data carpentry - R Genomics
• R intro
• Tidy
• Tidyverse